Epithelial Cadherin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-9   PRO-10  5.5 5.7 -0.6 4.5 123.0 115.8 87.2
 PRO-10   GLU-11  6.0 6.1 2.4 3.2 120.3 120.0 -121.9
 GLU-11   ASN-12  5.5 5.5 4.2 6.0 113.8 117.0 -89.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-16   PHE-17  10.4 9.9 31.9 -9.2 102.1 109.4 -177.0
 PHE-17   PRO-18  6.6 6.2 3.3 1.7 30.4 29.0 47.1
 PRO-18   LYS-19  4.9 4.9 13.2 -22.8 109.6 114.5 270.5
 LYS-19   ASN-20  7.6 7.5 6.4 -3.7 101.5 106.3 -50.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-68   GLU-69  4.1 4.1 -6.9 3.2 117.7 118.2 -123.7
 GLU-69   ALA-70  7.5 7.5 5.9 -8.7 116.4 120.2 134.4
 ALA-70   ILE-71  8.5 8.5 11.8 -4.1 82.9 88.9 -28.7
 ILE-71   ALA-72  6.1 6.1 1.3 -5.4 71.1 69.4 5.3
 ALA-72   LYS-73  3.3 3.2 10.0 -7.8 105.1 102.9 -62.6
 LYS-73   TYR-74  5.2 5.1 5.6 -9.7 137.3 137.4 69.0
 LYS-73   TYR-74  5.2 5.1 5.6 -9.7 137.3 137.4 69.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-73   TYR-74  5.2 5.1 5.6 -9.7 137.3 137.4 69.0
 LYS-73   TYR-74  5.2 5.1 5.6 -9.7 137.3 137.4 69.0
 TYR-74   ILE-75  7.2 7.3 -10.8 18.6 95.4 94.1 20.2
 ILE-75   LEU-76  10.8 10.8 13.3 -5.5 156.3 160.3 -98.2
 LEU-76   TYR-77  11.8 11.8 -5.9 0.3 87.9 87.5 -4.3
 TYR-77   SER-78  15.1 15.1 -16.6 13.7 26.5 21.9 50.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-93   ILE-94  16.1 16.1 4.3 -8.1 83.9 85.2 59.2
 ILE-94   VAL-95  12.8 12.9 -6.6 10.5 123.3 122.3 11.2
 VAL-95   ILE-96  10.1 10.2 16.8 -19.2 93.7 100.1 75.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees