Alanine Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-129
PRO-130
16.4
16.3
2.1
-0.1
80.3
77.6
169.2
PRO-130
MET-131
13.8
13.6
-2.7
6.3
33.9
34.1
-210.7
MET-131
SER-132
13.5
13.3
2.2
-6.7
127.4
128.2
180.9
SER-132
GLU-133
13.2
13.0
8.0
-11.5
70.7
70.2
-122.8
GLU-133
VAL-134
10.5
10.4
9.7
-8.3
106.5
103.8
-72.3
VAL-134
ALA-135
8.1
8.1
2.4
-7.5
169.9
170.5
229.9
ALA-135
GLY-136
8.7
8.7
3.7
0.3
101.9
102.4
-66.6
GLY-136
ARG-137
7.8
7.9
-2.1
1.0
106.1
105.1
-18.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-230
ASP-231
10.9
10.8
-1.5
1.8
100.9
101.3
-38.8
ASP-231
LEU-232
8.4
8.4
-1.9
3.9
67.7
69.4
1.0
LEU-232
LEU-233
6.4
6.2
2.5
-1.5
94.5
93.9
107.2
LEU-233
ILE-234
8.0
7.8
3.1
-5.2
121.8
122.8
162.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-247
VAL-248
17.6
17.8
-16.9
18.4
61.3
59.1
-20.9
VAL-248
THR-249
14.8
14.7
-1.9
-1.7
36.6
36.5
207.1
THR-249
ARG-250
14.6
14.7
0.5
1.6
115.1
114.8
-120.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-260
VAL-261
4.9
4.9
-5.8
8.3
77.8
77.3
-31.5
VAL-261
ILE-262
2.4
2.3
5.6
-3.7
113.7
111.7
-35.1
ILE-262
VAL-263
5.0
4.8
0.1
-3.7
128.1
130.4
63.6
VAL-263
ASP-264
5.8
5.7
4.0
-10.1
101.5
101.5
33.1
ASP-264
VAL-265
9.6
9.5
-12.3
8.8
42.3
45.1
260.8
VAL-265
ALA-266
10.8
10.8
-23.8
10.1
96.8
103.9
44.7
TYR-286
VAL-287
6.7
6.7
10.7
-13.2
74.3
77.6
-124.8
VAL-287
VAL-288
3.5
3.6
13.5
-13.8
42.4
43.6
-56.2
VAL-288
ASP-289
3.8
3.9
2.6
2.1
80.7
82.9
44.8
ASP-289
GLY-290
2.9
3.2
-13.9
17.5
59.9
61.8
-110.6
GLY-290
VAL-291
2.0
2.0
-15.8
19.8
9.1
7.7
-156.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees