Adp-Dependent Glucokinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-39   ASN-40  3.4 3.2 3.8 -9.9 85.2 86.6 9.3
 ASN-40   ILE-41  0.9 0.5 4.2 -4.3 156.5 152.9 -18.0
 ILE-41   ASP-42  3.3 3.3 7.0 -8.1 90.4 88.6 -31.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-111   GLY-112  19.2 19.3 -4.3 -5.3 134.1 138.4 -128.6
 GLY-112   TRP-113  15.9 16.2 -13.5 17.0 105.0 102.9 48.3
 TRP-113   ASP-114  13.5 13.5 -9.3 18.4 173.7 175.6 62.5
 ASP-114   GLU-115  12.9 13.1 -9.2 -3.8 106.2 108.4 76.9
 GLU-115   LEU-116  9.2 9.3 19.3 -5.3 145.4 146.4 -197.3
 LEU-116   ARG-117  6.3 6.4 15.5 -16.2 81.3 78.1 112.0
 ARG-117   ILE-118  4.0 3.5 1.4 0.1 146.3 150.3 -21.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-182   ILE-183  4.8 5.1 3.0 -10.9 126.7 129.6 120.2
 ILE-183   HIS-184  6.9 6.8 7.9 -7.5 69.0 69.1 -45.5
 HIS-184   TYR-185  8.1 8.0 -9.8 5.9 43.3 41.5 33.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-211   ASP-212  5.6 5.4 2.2 -5.0 159.9 164.6 73.6
 ASP-212   TYR-213  4.8 4.8 -5.2 5.7 78.8 80.5 -22.6
 TYR-213   ASN-214  1.8 2.1 -1.3 -0.1 91.4 91.6 13.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-439   VAL-440  24.9 25.2 9.0 -15.4 139.1 140.4 56.0
 VAL-440   ALA-441  22.7 23.0 -1.9 -15.3 101.5 103.9 24.1
 ALA-441   SER-442  24.7 24.8 177.6 173.3 82.8 100.1 10.2
 SER-442   PRO-443  22.2 22.7 -1.3 -11.4 98.0 77.9 -31.1
 PRO-443   LYS-444  18.9 19.2 18.3 -17.0 93.9 89.2 -16.3
 LYS-444   SER-445  15.8 15.9 -39.0 82.8 158.0 154.0 568.3
 SER-445   THR-446  14.8 13.5 118.0 -176.3 53.0 35.5 -640.6
 THR-446   VAL-447  16.0 15.5 26.0 -13.7 51.5 32.4 118.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees