Endo-1,4-Beta-Xylanase II

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-75   VAL-76  7.7 7.7 3.9 0.8 31.5 35.4 57.9
 VAL-76   TYR-77  5.0 4.9 -13.8 10.2 74.5 74.7 59.7
 TYR-77   GLY-78  7.3 7.2 11.0 -8.5 44.4 43.4 45.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-87   TYR-88  8.2 8.3 -6.1 6.9 82.1 86.6 38.1
 TYR-88   ILE-89  6.2 6.3 -1.9 -3.2 111.8 108.9 0.6
 ILE-89   VAL-90  3.2 3.3 -10.8 10.2 93.7 94.2 -20.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-95   TYR-96  17.6 17.6 11.7 -2.4 115.2 114.0 -96.3
 TYR-96   ASN-97  15.2 15.3 -11.0 1.6 111.5 106.4 -54.2
 ASN-97   PRO-98  11.5 11.6 5.8 1.7 73.4 77.2 17.9
 PRO-98   SER-99  11.6 11.1 -4.6 0.3 69.4 56.4 17.9
 SER-99   THR-100  9.2 8.9 6.6 -3.3 155.5 153.8 -72.5
 THR-100   GLY-101  11.2 11.3 -5.5 -13.2 87.6 77.8 100.4
 GLY-101   ALA-102  12.6 12.2 -2.2 10.6 112.0 113.4 83.7
 ALA-102   THR-103  10.6 10.6 1.3 2.4 131.0 122.5 -31.8
 THR-103   LYS-104  9.5 9.3 -0.1 -3.7 109.2 116.1 -38.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-105   GLY-106  7.5 7.2 3.5 -1.8 83.5 86.8 -18.1
 GLY-106   GLU-107  5.7 5.4 -8.2 3.4 67.5 68.6 53.5
 GLU-107   VAL-108  4.5 4.3 -3.7 0.5 43.6 44.7 55.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-117   TYR-118  3.4 3.4 1.2 -4.4 121.2 119.0 30.3
 TYR-118   ARG-119  6.5 6.6 -6.1 8.7 127.9 128.0 33.6
 ARG-119   THR-120  10.1 10.2 -13.6 16.3 65.9 67.6 -5.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-136   TYR-137  12.0 12.0 4.2 4.7 63.9 66.1 128.0
 TYR-137   TRP-138  8.6 8.6 0.2 -1.2 94.4 87.9 19.7
 TRP-138   SER-139  5.7 5.8 8.4 -16.5 75.2 77.2 -46.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-151   THR-152  6.0 5.9 2.4 -1.2 111.3 113.8 -25.3
 THR-152   ALA-153  3.7 3.5 4.0 -1.9 109.2 109.7 -0.7
 ALA-153   ASN-154  7.4 7.2 -2.5 1.5 11.8 11.5 1.1
 ASN-154   HIS-155  7.5 7.4 -0.2 1.2 55.2 55.8 5.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-165   LEU-166  14.9 14.0 61.1 -64.4 139.8 133.2 77.9
 LEU-166   GLY-167  13.0 13.0 -3.3 4.3 39.0 41.9 46.4
 GLY-167   THR-168  15.1 15.3 -0.5 3.2 30.5 27.2 -53.6
 THR-168   MET-169  14.0 14.4 -2.9 7.9 97.9 95.4 -32.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-170   TYR-171  10.9 11.2 -3.1 1.6 84.7 84.1 48.5
 TYR-171   GLN-172  8.8 9.0 -5.2 8.2 139.4 140.4 39.4
 GLN-172   ILE-173  5.8 5.8 -0.9 -0.4 76.8 76.1 10.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees