Glutamate Receptor Subunit 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-534   THR-535  5.8 5.9 -10.0 3.9 35.6 33.3 30.5
 THR-535   LEU-536  3.3 3.8 -11.5 2.0 109.5 107.1 20.8
 LEU-536   GLY-537  0.5 1.2 15.5 -26.6 145.9 141.9 31.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-759   ASP-760  8.4 8.4 -26.8 15.3 120.0 128.2 -43.0
 ASP-760   SER-761  4.7 4.9 1.2 3.1 125.1 121.0 -2.3
 SER-761   LYS-762  1.4 1.4 15.7 -14.1 83.9 85.9 66.7
 LYS-762   GLY-763  2.4 2.2 -0.3 -7.2 41.6 36.2 24.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees