Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-107
LEU-108
3.7
3.9
1.6
-6.1
40.7
42.5
-16.8
LEU-108
GLY-109
0.5
0.7
-3.3
-26.5
62.3
63.0
58.4
GLY-109
ILE-110
3.3
3.4
10.9
11.6
43.3
42.5
46.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-193
ILE-194
2.6
1.9
-0.2
0.6
55.3
57.2
17.0
ILE-194
GLU-195
2.4
2.9
-10.0
-11.6
68.5
67.1
52.0
GLU-195
TYR-196
2.7
3.6
18.4
-7.5
144.0
131.7
-36.2
TYR-196
VAL-197
2.4
2.6
-0.2
1.5
33.9
26.3
-4.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-211
ASP-212
9.2
9.3
6.6
-1.3
30.0
34.0
28.9
ASP-212
SER-213
6.5
6.5
-2.2
10.6
83.3
85.0
-8.6
SER-213
LYS-214
2.8
2.8
2.2
23.9
68.9
80.9
49.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees