Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-92   VAL-93  5.8 5.9 -11.8 14.2 164.3 159.6 26.6
 VAL-93   SER-94  3.8 3.9 -4.8 22.0 96.1 95.5 49.4
 SER-94   GLY-95  3.3 3.6 49.4 -31.9 13.7 29.4 125.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-293   GLU-294  7.0 7.4 -5.1 -0.7 54.5 49.2 24.5
 GLU-294   ASP-295  7.1 7.2 0.4 -9.7 85.0 86.6 11.0
 ASP-295   VAL-296  4.0 4.0 12.3 -3.5 30.6 34.8 86.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees