Sarcoplasmic/endoplasmic Reticulum Calcium Atpase 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-42   ALA-43  13.0 13.3 -96.7 73.4 85.7 75.9 -2.7
 ALA-43   GLU-44  12.3 11.6 60.9 -42.9 133.0 148.1 -53.2
 GLU-44   GLU-45  15.6 14.5 66.0 41.8 95.6 105.6 -13.4
 GLU-45   GLY-46  16.5 13.7 -33.9 -1.6 60.0 36.0 97.9
 GLY-46   LYS-47  15.7 16.6 16.3 99.8 52.1 133.7 -24.6
 LYS-47   SER-48  13.2 16.0 120.6 89.7 126.0 79.6 145.2
 SER-48   LEU-49  12.1 16.6 40.0 79.4 146.1 130.4 -253.4
 LEU-49   TRP-50  13.8 19.6 -179.5 0.5 51.4 26.2 471.5
 TRP-50   GLU-51  13.4 16.9 -136.4 -44.8 93.4 67.7 -41.6
 GLU-51   LEU-52  14.9 15.7 79.5 -84.8 138.8 88.9 -1.6
 LEU-52   VAL-53  15.9 19.5 -132.7 -73.0 69.0 47.7 -378.5
 VAL-53   ILE-54  19.3 20.1 36.2 -65.5 162.2 136.2 58.0
 ILE-54   GLU-55  17.9 16.9 -57.0 6.1 78.1 79.3 30.9
 GLU-55   GLN-56  15.6 15.3 0.4 0.0 101.8 94.7 27.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-119   LYS-120  4.7 5.4 -15.9 75.1 42.4 36.7 -132.8
 LYS-120   GLU-121  6.7 8.2 -62.2 39.0 44.7 27.1 75.0
 GLU-121   TYR-122  8.1 8.3 14.3 -20.3 117.9 111.5 -4.1
 TYR-122   GLU-123  5.5 5.2 -135.3 74.9 12.8 16.3 180.5
 GLU-123   PRO-124  5.0 5.8 6.0 45.4 110.2 106.8 -75.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-238   MET-239  21.3 20.6 6.2 36.0 65.9 67.9 29.9
 MET-239   ALA-240  19.7 18.9 -2.8 16.0 51.8 70.6 -3.9
 ALA-240   ALA-241  20.4 20.9 0.6 70.7 127.6 166.9 -196.3
 ALA-241   THR-242  18.6 23.0 108.0 -21.7 72.6 131.4 117.7
 THR-242   GLU-243  16.5 20.6 -70.3 86.4 42.6 118.6 129.1
 GLU-243   GLN-244  17.2 18.6 157.8 41.1 74.4 108.1 49.4
 GLN-244   ASP-245  15.7 17.8 -41.9 -15.8 68.1 59.0 114.9
 ASP-245   LYS-246  17.3 21.2 150.1 -31.7 140.9 132.3 -261.2
 LYS-246   THR-247  16.5 20.8 -36.8 -31.4 94.2 97.3 -7.9
 THR-247   PRO-248  15.7 17.9 -23.7 8.1 45.8 39.5 50.7
 PRO-248   LEU-249  18.4 19.4 -10.5 -2.3 24.8 30.2 43.8
 LEU-249   GLN-250  16.1 16.6 -51.0 38.2 60.0 67.8 33.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees