Leu/ile/val-Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-116   THR-117  9.4 9.7 1.9 6.0 146.1 146.6 -11.1
 THR-117   THR-118  9.6 9.7 5.4 -16.1 123.7 117.4 10.1
 THR-118   GLY-119  6.6 6.4 36.6 -10.2 65.2 53.2 15.5
 GLY-119   LEU-120  3.0 2.8 29.1 -5.4 65.2 41.8 15.7
 LEU-120   ASP-121  1.6 1.9 -12.6 -21.4 66.6 75.3 22.0
 ASP-121   SER-122  4.2 5.0 29.3 -18.3 75.2 65.9 -4.5
 SER-122   ASP-123  4.6 4.8 13.9 -39.7 122.0 135.0 30.4
 ASP-123   GLN-124  4.1 4.5 -30.7 12.3 39.4 41.8 30.1
 GLN-124   GLY-125  6.0 5.4 -16.1 -1.4 103.4 96.6 -1.3
 GLY-125   PRO-126  9.1 8.8 9.0 -0.3 104.0 101.6 -0.6
 PRO-126   THR-127  9.8 9.8 2.7 -4.0 168.5 165.3 2.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-246   THR-247  9.6 9.8 12.7 -4.5 107.2 107.3 8.9
 THR-247   LYS-248  6.6 6.9 5.4 -5.3 93.8 89.6 12.0
 LYS-248   PRO-249  3.8 4.5 4.0 -19.5 82.2 82.3 -4.0
 PRO-249   LYS-250  1.4 2.5 26.2 8.0 28.5 15.3 54.9
 LYS-250   ASN-251  2.1 2.1 5.9 16.2 61.5 57.1 18.2
 ASN-251   TYR-252  3.9 4.0 -1.7 -2.6 96.7 95.6 2.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-323   LEU-324  6.4 6.9 0.0 -6.3 129.8 132.6 0.6
 LEU-324   LYS-325  7.5 7.6 -6.9 26.9 100.9 93.5 -4.2
 LYS-325   GLY-326  8.6 8.7 -3.7 -0.2 34.6 21.1 4.2
 GLY-326   PHE-327  9.5 8.2 1.7 -10.2 145.3 131.4 7.0
 PHE-327   GLU-328  6.7 5.0 6.0 -14.5 122.9 104.0 7.8
 GLU-328   PHE-329  6.1 3.4 6.6 -14.2 128.9 120.6 13.2
 PHE-329   GLY-330  3.4 2.1 -33.7 -12.4 30.4 46.3 59.2
 GLY-330   VAL-331  4.1 3.9 10.0 11.5 95.1 100.0 -5.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees