Aspartyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 MET-270   THR-271  7.1 8.0 22.1 -25.9 134.4 143.1 10.3
 THR-271   PHE-272  5.2 6.2 -10.2 12.1 107.1 99.9 15.2
 PHE-272   ALA-273  2.4 3.0 5.3 -7.6 101.3 100.9 -3.7
 ALA-273   GLU-274  5.6 6.2 -1.5 3.9 132.8 135.1 16.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LEU-419   THR-420  13.5 13.7 -0.6 -15.2 106.3 106.8 -0.3
 THR-420   ASP-421  9.9 10.0 0.2 -13.6 135.0 141.7 47.1
 ASP-421   GLU-422  9.0 8.6 -3.8 11.1 81.7 96.9 3.1
 GLU-422   SER-423  5.5 4.9 14.3 -22.1 101.0 105.0 14.0
 SER-423   LYS-424  6.1 5.4 46.9 -43.0 38.2 51.8 -22.8
 LYS-424   TRP-425  7.5 7.4 -5.4 13.5 119.5 130.6 5.6
 TRP-425   ALA-426  6.6 7.1 -6.1 6.8 159.0 152.7 3.4
 ALA-426   PRO-427  6.2 6.9 1.3 4.7 44.4 40.6 21.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 VAL-430   ILE-431  3.6 4.4 6.9 -6.9 146.1 145.6 -0.4
 ILE-431   ASP-432  4.8 5.4 8.7 -7.0 141.9 144.3 -0.3
 ASP-432   PHE-433  3.6 4.4 1.5 3.2 86.9 88.8 6.0
 PHE-433   PRO-434  1.9 1.8 -11.2 15.8 18.5 19.1 -20.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ASN-472   ALA-473  8.1 8.3 -2.2 3.4 148.1 146.3 -7.7
 ALA-473   TYR-474  7.6 7.7 -7.4 16.0 136.3 142.1 37.3
 TYR-474   ASP-475  6.8 7.5 7.7 -13.3 29.8 34.7 -4.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 MET-476   VAL-477  6.5 7.0 -9.6 15.9 50.7 50.1 -64.3
 VAL-477   ILE-478  3.5 4.1 -1.2 -2.4 37.1 30.9 48.7
 ILE-478   ASN-479  3.5 4.4 -15.6 7.3 58.9 59.0 14.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees