Bacterial Sialidase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-411
ASP-412
4.6
4.9
7.0
-17.6
123.1
122.1
36.7
ASP-412
VAL-413
1.3
1.9
-15.5
33.4
137.4
127.4
86.7
VAL-413
ALA-414
2.1
1.8
-15.1
4.1
65.5
73.2
-23.9
ALA-414
LEU-415
5.6
5.1
-6.5
-3.9
61.7
61.0
118.0
ALA-414
LEU-415
5.6
5.1
-6.5
-3.9
61.7
61.0
118.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-414
LEU-415
5.6
5.1
-6.5
-3.9
61.7
61.0
118.0
ALA-414
LEU-415
5.6
5.1
-6.5
-3.9
61.7
61.0
118.0
LEU-415
GLU-416
8.9
8.2
-7.9
-2.2
121.7
115.0
-69.1
GLU-416
PRO-417
12.5
11.9
-12.6
-8.3
123.1
119.9
41.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-475
THR-476
14.7
14.2
-14.1
6.9
78.5
89.4
110.9
THR-476
PRO-477
13.8
13.8
8.5
14.3
56.6
61.0
17.5
PRO-477
GLY-478
12.4
12.3
-4.9
-140.6
55.0
69.0
212.5
GLY-478
ARG-479
9.2
8.7
-7.7
174.8
118.0
41.8
-470.2
ARG-479
TYR-480
5.5
5.7
-38.6
-14.2
53.3
60.7
177.5
TYR-480
ARG-481
4.2
3.5
7.0
-20.9
79.1
79.3
-48.9
TYR-480
ARG-481
4.2
3.5
7.0
-20.9
79.1
79.3
-48.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-480
ARG-481
4.2
3.5
7.0
-20.9
79.1
79.3
-48.9
TYR-480
ARG-481
4.2
3.5
7.0
-20.9
79.1
79.3
-48.9
ARG-481
VAL-482
2.3
1.5
-0.2
-5.2
93.3
93.4
76.2
VAL-482
GLY-483
5.8
5.1
-4.9
2.8
84.6
84.2
-19.9
GLY-483
ALA-484
8.3
7.8
-5.6
9.8
128.7
126.5
31.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-495
THR-496
10.7
10.7
0.2
-13.8
103.8
101.3
88.5
THR-496
PHE-497
6.9
6.9
-29.7
25.1
143.7
139.5
-35.3
PHE-497
THR-498
4.0
4.3
18.6
-14.0
107.9
110.8
-23.2
THR-498
VAL-499
0.6
0.5
8.7
-19.1
43.9
48.6
-47.4
VAL-499
THR-500
3.8
3.1
-2.3
-10.6
72.8
70.1
54.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees