Non-Ribosomal Peptide Synthetase Modules

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-176   LEU-177  2.9 3.3 -7.9 10.8 99.0 103.3 18.5
 LEU-177   GLN-178  5.7 5.8 -11.3 -11.4 64.9 73.8 10.7
 GLN-178   LEU-179  4.9 4.9 12.9 0.3 40.4 51.0 55.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-273   VAL-274  12.1 11.9 -140.7 120.6 104.6 90.4 -72.5
 VAL-274   ARG-275  11.1 10.6 -82.3 -12.0 158.8 145.1 -644.0
 ARG-275   PHE-276  11.4 9.6 -22.6 12.6 90.2 134.9 -14.6
 PHE-276   GLY-277  10.9 10.9 132.6 -58.1 25.0 45.4 433.9
 GLY-277   ALA-278  10.0 9.7 -130.1 10.3 109.0 91.9 -205.6
 ALA-278   ASP-279  6.4 5.9 -158.2 1.3 136.3 43.6 221.7
 ASP-279   ARG-280  6.1 5.5 36.1 39.1 103.8 82.8 230.2
 ARG-280   HIS-281  5.1 7.9 172.4 -36.7 171.0 68.0 -585.2
 HIS-281   ILE-282  6.1 5.7 -118.6 -12.0 71.1 61.4 431.4
 ILE-282   PRO-283  3.7 3.7 -10.4 1.7 40.8 38.8 44.0
 PRO-283   GLY-284  6.3 6.3 2.6 57.6 145.1 139.4 -413.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-285   LYS-286  4.1 4.8 4.7 -51.4 60.4 95.4 874.9
 LYS-286   SER-287  6.5 5.7 174.9 14.6 101.0 56.3 -117.7
 SER-287   ASN-288  9.8 9.0 -6.1 -20.6 139.3 149.0 -143.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-346   MET-347  22.4 21.2 1.2 35.1 37.9 45.7 186.7
 MET-347   PRO-348  21.1 19.6 -58.1 -9.8 118.0 148.1 -332.1
 PRO-348   PHE-349  22.7 21.0 -111.8 -37.3 78.3 133.6 -262.1
 PHE-349   ASP-350  23.3 19.2 -12.3 23.1 128.6 113.2 88.2
 ASP-350   LEU-351  20.8 21.1 -15.6 -22.6 131.7 63.3 12.1
 LEU-351   ASP-352  22.0 22.9 -150.4 -28.1 79.5 129.8 499.6
 ASP-352   LEU-353  24.0 24.1 -6.3 -31.2 132.1 117.5 -119.0
 LEU-353   SER-354  22.7 22.6 5.2 -1.2 59.3 51.5 -6.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-369   ALA-370  13.6 13.7 -18.0 -29.2 94.4 97.1 -122.8
 ALA-370   GLU-371  15.5 16.5 -40.2 41.3 113.0 154.3 -60.3
 GLU-371   ASP-372  14.6 15.0 -124.7 162.9 107.0 124.0 56.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees