Leu/ile/val-Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-116   THR-117  9.9 10.0 -2.0 6.8 32.4 32.7 -10.7
 THR-117   THR-118  10.0 10.0 4.3 -19.8 121.1 117.5 15.5
 THR-118   GLY-119  6.9 6.6 32.7 -11.1 63.8 49.3 11.5
 GLY-119   LEU-120  3.3 3.2 27.6 -2.5 62.8 41.5 19.4
 LEU-120   ASP-121  1.8 2.0 -8.9 -22.3 68.9 76.4 15.9
 ASP-121   SER-122  3.9 4.6 33.6 -19.5 75.0 65.8 0.0
 SER-122   ASP-123  4.1 4.1 10.7 -36.6 123.6 134.7 28.3
 ASP-123   GLN-124  3.8 4.0 -34.2 15.2 41.5 44.8 33.0
 GLN-124   GLY-125  5.7 4.9 -17.7 2.1 104.5 97.8 -0.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-246   THR-247  9.7 9.8 5.1 3.1 104.6 105.4 9.1
 THR-247   LYS-248  6.6 6.8 9.6 -14.6 93.4 85.1 21.7
 LYS-248   PRO-249  4.0 4.7 -4.9 -8.9 100.4 102.4 -14.1
 PRO-249   LYS-250  1.6 2.9 22.0 8.2 26.5 18.1 49.5
 LYS-250   ASN-251  1.9 2.0 4.9 17.1 60.7 51.4 28.0
 ASN-251   TYR-252  3.7 3.7 -16.9 10.5 99.3 98.8 6.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-324   LYS-325  7.8 7.8 -14.1 42.0 101.9 94.9 -1.7
 LYS-325   GLY-326  8.8 9.0 -5.4 -4.2 34.7 27.8 11.8
 GLY-326   PHE-327  9.5 8.1 -1.2 0.3 35.4 50.6 -1.8
 PHE-327   GLU-328  6.7 4.9 7.0 -22.9 120.4 102.8 11.0
 GLU-328   PHE-329  5.9 3.3 3.6 -14.6 127.7 127.1 17.8
 PHE-329   GLY-330  3.1 1.8 -27.7 -11.4 30.6 47.5 50.6
 GLY-330   VAL-331  3.9 3.8 8.5 11.3 92.6 95.5 2.7
 VAL-331   PHE-332  6.9 7.0 0.4 -1.7 164.2 166.5 2.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees