Glutamate Receptor, Ionotropic Kainate 2
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-531
PRO-532
6.3
6.5
3.8
-9.6
169.8
160.7
101.9
PRO-532
PHE-533
5.2
5.1
2.6
-4.4
128.3
134.2
-53.3
PHE-533
MET-534
7.0
6.8
2.4
-6.3
143.2
144.6
26.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-762
GLY-763
6.1
6.0
-80.3
124.0
80.8
115.6
35.0
GLY-763
TYR-764
3.3
3.1
27.7
4.5
100.6
94.7
-10.1
TYR-764
GLY-765
1.1
1.1
1.0
-14.6
125.3
127.9
30.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-793
MET-794
13.7
13.3
20.2
-2.1
102.5
95.4
-61.1
MET-794
LYS-795
11.2
11.1
17.4
-18.5
109.8
110.4
-12.4
LYS-795
GLU-796
8.0
7.9
3.6
-10.9
165.7
171.4
52.0
GLU-796
LYS-797
9.8
9.4
9.1
-3.3
127.2
121.7
-25.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees