Atp Synthase Subunit Beta

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-129   GLN-130  3.3 3.4 -53.1 19.1 38.3 50.4 110.0
 GLN-130   GLU-131  1.0 0.5 -24.5 -2.9 87.0 97.7 -18.5
 GLU-131   ILE-132  4.2 4.2 -49.5 69.3 43.0 32.9 -41.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-149   GLY-150  4.0 4.2 17.7 -0.7 72.2 81.7 4.5
 GLY-150   LYS-151  2.2 1.4 -6.0 19.7 174.6 163.3 45.1
 LYS-151   ILE-152  3.3 3.0 -7.1 5.4 98.3 105.8 4.3
 ILE-152   GLY-153  3.8 3.2 6.1 -33.1 23.2 25.7 -118.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-170   ASN-171  10.3 9.8 -11.0 4.4 84.7 80.3 2.2
 ASN-171   ASN-172  13.9 13.4 18.2 -32.9 158.7 160.0 61.6
 ASN-172   VAL-173  14.3 13.6 25.0 -52.8 126.8 135.5 94.2
 VAL-173   ALA-174  12.6 11.3 -153.1 112.9 105.9 101.9 72.4
 ALA-174   LYS-175  16.0 11.5 -140.6 132.0 36.9 96.2 64.7
 LYS-175   ALA-176  16.9 15.0 99.2 -91.2 139.6 144.2 -34.6
 ALA-176   HIS-177  15.6 16.2 141.4 -43.3 89.9 135.2 -214.6
 HIS-177   GLY-178  13.5 13.9 123.9 -165.6 39.8 99.7 -55.3
 GLY-178   GLY-179  15.7 15.8 1.9 167.6 26.1 48.3 868.9
 GLY-179   TYR-180  14.0 15.1 -158.4 -19.8 138.5 170.1 -778.0
 TYR-180   SER-181  13.3 14.2 17.6 9.4 72.4 75.8 25.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-184   GLY-185  6.4 6.6 -2.9 11.2 52.8 56.5 4.9
 GLY-185   VAL-186  4.4 4.5 15.8 -37.6 112.5 107.3 38.1
 VAL-186   GLY-187  5.9 5.5 0.5 -13.8 139.9 124.6 98.5
 GLY-187   GLU-188  5.4 5.5 -16.5 -40.6 79.6 77.1 114.1
 GLU-188   ARG-189  2.8 1.9 71.9 -5.7 164.1 145.6 -343.5
 ARG-189   THR-190  0.9 0.7 4.1 -6.7 105.2 89.6 53.1
 THR-190   ARG-191  4.1 3.8 -2.0 -0.8 84.9 89.9 -10.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-217   VAL-218  11.0 11.4 0.4 -3.3 110.5 110.0 34.4
 VAL-218   TYR-219  10.4 10.6 5.2 -20.5 125.3 125.2 28.4
 TYR-219   GLY-220  8.5 8.5 16.0 -45.4 111.2 120.9 57.4
 GLY-220   GLN-221  8.6 8.5 -4.4 -16.2 49.3 78.1 50.4
 GLN-221   MET-222  6.6 5.3 32.6 -12.9 112.0 125.7 -54.3
 MET-222   ASN-223  6.0 5.3 41.4 -12.5 136.4 158.3 -122.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-254   ILE-255  3.4 3.7 10.1 -5.8 128.8 135.1 -15.9
 ILE-255   ASP-256  3.1 2.9 18.7 -10.2 121.3 121.3 21.3
 ASP-256   ASN-257  1.5 1.1 1.4 -7.4 144.7 143.8 -27.4
 ASN-257   ILE-258  4.3 3.9 -19.5 8.5 110.2 103.4 -18.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-329   ASP-330  7.8 7.7 7.7 4.0 24.2 22.8 39.8
 ASP-330   ALA-331  6.4 6.0 -12.6 22.4 81.8 81.6 30.1
 ALA-331   THR-332  7.2 6.7 -33.6 19.7 13.1 20.6 57.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees