Purs

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-7   VAL-8  3.0 2.7 -3.5 6.6 93.2 92.9 26.9
 VAL-8   SER-9  3.6 3.3 -3.8 -1.5 101.4 98.3 26.4
 SER-9   LEU-10  4.5 4.4 -3.7 1.6 83.5 76.9 55.2
 LEU-10   LYS-11  8.2 8.2 4.4 0.4 161.1 163.6 -44.9
 LYS-11   GLU-12  9.9 9.9 6.0 15.4 92.2 97.3 -49.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-13   VAL-14  14.5 14.8 -9.6 24.9 158.0 165.5 143.6
 VAL-14   LEU-15  14.8 14.1 -7.7 -13.4 118.3 121.6 -104.0
 LEU-15   ASP-16  16.1 15.1 5.4 5.3 52.1 45.0 57.7
 ASP-16   PRO-17  13.4 12.6 8.1 -4.4 44.8 38.9 20.6
 PRO-17   GLN-18  15.0 14.4 10.9 -3.1 66.1 55.1 90.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-38   ILE-39  9.1 9.2 -7.1 14.9 60.0 57.2 -58.4
 ILE-39   GLY-40  6.2 6.5 0.2 -4.0 83.2 79.5 4.9
 GLY-40   LYS-41  2.7 3.3 33.3 -42.9 119.9 118.9 29.5
 LYS-41   TYR-42  0.9 0.8 11.9 -4.1 51.5 48.5 84.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees