Glutamate Receptor 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-108   LEU-109  9.5 9.5 -1.6 -0.9 59.5 57.6 9.5
 LEU-109   GLY-110  7.2 7.3 3.1 -4.5 169.3 167.7 29.9
 GLY-110   ILE-111  6.7 6.7 -0.8 3.4 65.2 64.7 -33.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-194   THR-195  3.7 3.9 -8.4 -1.1 19.2 19.6 118.5
 THR-195   MET-196  2.4 3.0 10.8 -4.4 93.4 94.8 -32.7
 MET-196   ASN-197  2.5 2.4 3.9 -1.2 70.8 67.9 -14.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-199   ILE-200  6.1 6.1 -6.7 9.1 73.8 73.5 2.3
 ILE-200   GLU-201  8.6 8.6 0.4 -3.1 96.0 90.3 107.2
 GLU-201   GLN-202  10.8 10.7 2.2 3.2 33.0 27.2 62.9
 GLN-202   ARG-203  11.7 11.2 -10.5 4.5 112.6 105.7 -89.9
 ARG-203   LYS-204  12.7 12.5 0.1 1.5 118.2 118.0 -22.4
 LYS-204   PRO-205  16.4 16.2 1.2 -3.7 135.4 143.6 36.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-213   ASN-214  11.1 11.0 0.3 0.4 85.6 82.6 0.0
 ASN-214   LEU-215  8.5 8.3 3.6 1.0 35.0 37.2 37.1
 LEU-215   ASP-216  7.9 7.8 6.2 -6.3 100.7 102.8 6.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees