Actin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-142   TYR-143  4.1 4.5 -16.6 15.4 79.5 75.7 2.7
 TYR-143   ALA-144  6.8 7.4 -5.3 -9.7 74.4 75.6 -3.4
 ALA-144   SER-145  5.4 6.0 11.4 2.4 36.7 39.1 11.6
 SER-145   GLY-146  5.3 6.0 154.8 -152.8 56.8 63.3 49.8
 GLY-146   ARG-147  8.6 8.8 25.5 -29.3 45.2 40.8 -19.5
 ARG-147   THR-148  7.7 8.0 4.2 -5.4 113.7 110.9 69.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-333   GLU-334  10.1 9.9 20.7 -2.8 27.3 18.8 66.6
 GLU-334   ARG-335  7.9 8.0 10.2 -5.6 88.6 82.0 17.2
 ARG-335   LYS-336  5.4 5.5 33.7 -26.9 48.2 49.2 43.1
 LYS-336   TYR-337  6.9 7.2 2.9 15.6 48.4 51.3 27.8
 TYR-337   SER-338  4.0 4.4 -10.4 19.7 62.1 67.4 14.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees