Glutamate Receptor Ionotropic, Nmda 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-143
GLN-144
6.7
6.7
-17.1
-1.0
54.9
52.6
53.5
GLN-144
GLY-145
3.1
3.2
8.0
6.4
53.0
55.6
42.4
GLY-145
LEU-146
1.3
0.6
5.5
-11.1
122.4
123.3
10.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-245
PHE-246
6.5
6.1
-7.2
5.1
71.0
69.9
16.1
PHE-246
ARG-247
4.0
3.8
-1.6
8.1
112.0
111.5
10.1
ARG-247
SER-248
2.6
1.8
-11.4
-4.3
59.7
61.0
41.7
SER-248
GLY-249
2.7
2.4
-13.9
15.7
122.9
126.8
0.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees