Intracellular Protein Transport Protein Uso1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-362   SER-363  5.7 5.8 0.3 3.3 8.8 10.5 -0.1
 SER-363   ASN-364  6.4 6.5 4.7 4.8 61.7 60.3 45.6
 ASN-364   GLU-365  4.0 4.0 15.9 -19.0 93.3 85.4 53.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-407   LEU-408  15.7 16.0 7.1 0.8 63.1 68.5 -14.1
 LEU-408   TYR-409  19.3 19.6 4.6 -3.6 7.5 6.8 22.8
 TYR-409   ALA-410  19.3 19.5 -10.8 16.8 130.4 130.7 40.8
 ALA-410   ASN-411  15.8 16.0 7.6 1.9 113.7 113.5 -165.5
 ALA-410   ASN-411  15.8 16.0 7.6 1.9 113.7 113.5 -165.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-410   ASN-411  15.8 16.0 7.6 1.9 113.7 113.5 -165.5
 ALA-410   ASN-411  15.8 16.0 7.6 1.9 113.7 113.5 -165.5
 ASN-411   SER-412  17.2 18.1 -69.6 132.3 25.3 28.2 -352.8
 SER-412   VAL-413  15.9 16.1 -135.7 20.6 94.2 101.2 14.0
 VAL-413   HIS-414  12.6 16.1 -9.7 16.1 130.0 124.6 150.9
 HIS-414   THR-415  11.5 12.5 -149.7 -18.8 96.7 142.8 1400.8
 THR-415   PHE-416  12.3 12.2 -161.2 -9.2 149.5 143.0 -977.0
 PHE-416   ASP-417  15.0 14.7 6.6 -10.4 40.7 43.8 -12.1
 ASP-417   THR-418  12.6 12.2 7.1 -7.7 66.3 59.6 6.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-674   ASP-675  28.9 28.4 6.3 -25.8 122.6 96.1 30.8
 ASP-675   MET-676  27.1 26.2 -20.3 11.2 31.4 29.4 26.6
 MET-676   ASN-677  26.3 25.6 -64.9 38.5 80.6 83.4 40.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-683   PRO-684  16.9 17.1 -10.9 8.2 95.1 76.5 15.1
 PRO-684   GLU-685  20.5 19.8 -20.2 2.5 27.3 26.4 104.5
 GLU-685   LEU-686  23.3 22.5 -19.1 32.8 63.6 61.7 97.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees