Sarcoplasmic/endoplasmic Reticulum Calcium Atpase 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-357   THR-358  3.7 2.2 -22.6 14.5 15.2 4.2 13.3
 THR-358   ASN-359  2.8 2.0 -8.2 5.2 55.1 70.1 4.9
 ASN-359   GLN-360  5.1 1.9 -23.1 -7.4 37.0 47.8 28.0
 GLN-360   MET-361  3.8 4.0 34.2 -5.7 72.5 55.9 24.4
 MET-361   SER-362  7.4 7.3 -7.4 22.1 71.6 71.8 -1.6
 SER-362   VAL-363  9.2 9.4 16.5 -9.0 55.9 50.6 13.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-598   MET-599  15.1 15.2 -15.8 -7.7 126.2 120.0 -17.7
 MET-599   LEU-600  11.7 11.9 -21.7 -5.5 52.6 60.8 26.4
 LEU-600   ASP-601  8.1 8.2 30.0 20.1 63.0 47.9 33.5
 ASP-601   PRO-602  5.4 4.7 3.5 -18.7 118.0 118.4 14.0
 PRO-602   PRO-603  2.6 5.2 34.7 -2.0 111.4 86.7 -6.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees