Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-298   LEU-299  5.2 4.4 14.3 -21.6 139.0 136.3 16.9
 LEU-299   PRO-300  2.3 2.0 -10.2 -18.8 72.2 68.2 22.0
 PRO-300   HIS-301  1.3 1.0 22.6 10.3 47.8 59.7 42.4
 HIS-301   ARG-302  4.4 4.4 -10.8 13.1 168.3 172.5 6.1

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees