Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-106
THR-107
6.0
6.3
-6.5
-11.9
41.7
33.9
48.3
THR-107
LEU-108
3.6
4.4
-20.2
26.7
111.4
111.0
1.1
LEU-108
GLY-109
1.2
1.9
-4.2
-7.1
38.2
43.0
24.1
GLY-109
ILE-110
3.7
3.7
1.3
9.6
65.6
63.8
8.7
ILE-110
SER-111
7.0
7.0
-3.4
1.2
102.9
101.1
2.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-210
ILE-211
8.5
8.3
-0.7
-12.7
160.4
148.1
-54.7
ILE-211
ASP-212
8.8
8.7
1.4
11.2
52.0
49.3
41.5
ASP-212
SER-213
5.1
5.2
-4.8
0.7
55.3
64.1
23.2
SER-213
LYS-214
2.3
2.2
6.4
3.8
78.3
84.9
15.9
LYS-214
GLY-215
1.5
1.7
-19.7
2.7
33.7
39.9
40.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees