D-Mandelate Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-108
SER-109
2.3
2.1
-5.8
-1.5
24.1
23.6
66.8
SER-109
ARG-110
2.6
2.3
13.4
-11.6
102.3
99.0
38.7
ARG-110
GLY-111
5.5
5.2
5.6
-3.9
141.5
147.0
-30.3
GLY-111
ALA-112
7.7
7.2
-6.0
-4.3
30.4
32.5
66.1
ALA-112
GLY-113
4.6
4.4
6.0
7.1
121.6
117.9
-40.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-312
PHE-313
2.8
2.7
0.6
6.5
104.2
106.0
-36.4
PHE-313
HIS-314
2.5
2.8
2.0
1.1
76.5
75.7
6.2
HIS-314
GLU-315
2.4
2.4
1.5
-5.2
136.4
140.2
-8.1
GLU-315
PHE-316
2.9
2.6
-4.1
-5.2
24.6
29.4
58.8
PHE-316
GLU-317
2.2
2.3
4.6
-5.5
89.8
87.3
4.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees