Bactericidal/permeability-Increasing Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-20   THR-21  1.5 9.0 -112.6 67.9 65.6 25.3 -144.3
 THR-21   THR-22  2.2 8.5 176.5 1.5 108.0 131.3 131.2
 THR-22   LYS-23  4.9 10.6 -12.7 -8.1 135.2 95.1 -4.8
 LYS-23   PHE-24  7.1 9.2 16.2 0.7 52.9 112.5 3.5
 PHE-24   PHE-25  5.6 5.6 5.3 -5.0 119.1 174.4 -0.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-38   MET-39  9.0 6.8 -84.5 71.1 115.7 30.3 9.6
 MET-39   LYS-40  6.3 6.8 -169.0 18.8 61.2 83.9 -31.3
 LYS-40   ILE-41  3.9 10.4 177.7 62.8 55.3 79.9 -29.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-73   LEU-74  4.2 6.0 -143.8 5.3 78.4 61.5 33.6
 LEU-74   PRO-75  6.5 6.3 157.7 -6.3 75.4 153.6 -36.6
 PRO-75   ASN-76  10.2 5.6 -36.0 47.9 56.5 96.1 0.3
 ASN-76   SER-77  10.8 3.1 -48.7 -143.1 95.1 96.2 127.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees