Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-107
LEU-108
8.1
7.8
15.9
-8.2
110.1
114.2
-13.2
LEU-108
GLY-109
4.5
4.1
-12.9
23.9
138.5
138.1
27.4
GLY-109
ILE-110
1.7
1.6
-44.8
29.4
63.4
68.5
25.5
ILE-110
SER-111
3.2
2.9
-1.9
-7.8
58.5
65.4
32.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-207
GLY-208
10.7
10.8
-8.2
-15.1
22.4
29.3
100.2
GLY-208
GLY-209
11.2
11.2
23.7
-36.5
98.5
88.1
-4.7
GLY-209
LEU-210
10.0
8.9
13.6
7.3
105.8
119.9
-52.0
LEU-210
ILE-211
6.6
5.9
0.3
6.5
158.3
157.5
-6.6
ILE-211
ASP-212
5.7
6.1
-163.5
149.4
69.2
45.8
-24.5
ASP-212
SER-213
2.8
3.4
134.3
-99.2
70.8
59.6
85.2
SER-213
LYS-214
4.4
4.1
-5.9
9.7
77.6
74.2
14.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees