Ureidoglycolate Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-179   THR-180  7.3 7.3 -1.1 6.3 72.4 69.7 14.2
 THR-180   VAL-181  3.6 3.6 5.2 -2.7 32.1 38.5 13.2
 VAL-181   GLN-182  2.8 2.5 -2.8 10.3 131.0 136.8 38.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-216   HIS-217  9.4 9.5 -0.4 7.0 134.0 138.9 29.1
 HIS-217   ALA-218  7.8 7.7 -4.3 8.6 78.9 78.4 14.6
 ALA-218   LEU-219  4.4 4.2 -6.1 -4.4 38.9 29.9 51.8
 LEU-219   LEU-220  2.0 2.2 3.4 5.6 72.9 75.3 28.8
 LEU-220   PRO-221  2.5 2.1 8.0 -4.4 120.7 116.6 -13.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees