Shikimate Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-105
ASP-106
6.3
6.2
-2.2
0.6
77.6
76.2
13.6
ASP-106
TRP-107
3.1
3.0
-6.4
7.7
107.0
105.5
22.6
TRP-107
ILE-108
2.4
1.7
2.5
2.3
128.3
127.7
-50.7
ILE-108
GLY-109
5.3
4.7
-5.4
-5.2
30.9
29.7
66.7
GLY-109
PHE-110
3.0
2.5
-0.3
1.2
93.3
92.9
2.4
PHE-110
LEU-111
2.9
2.6
0.9
-1.8
93.1
90.5
7.0
LEU-111
LYS-112
6.3
5.8
0.9
2.1
155.5
152.6
-18.7
LYS-112
SER-113
7.0
6.6
4.6
-0.6
127.5
127.2
5.3
SER-113
LEU-114
5.8
5.7
-0.7
2.6
105.7
103.7
6.3
LEU-114
LYS-115
8.7
8.7
3.4
6.7
104.7
107.9
-2.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-236
PRO-237
4.2
4.3
2.1
-2.1
100.6
101.1
-6.7
PRO-237
MET-238
2.2
2.1
-3.9
3.4
33.9
34.7
10.9
MET-238
LEU-239
1.1
1.1
-1.2
-0.6
98.6
98.4
-0.6
LEU-239
LEU-240
3.1
3.4
-5.0
12.0
118.9
118.5
14.4
LEU-240
TRP-241
2.9
3.0
-6.8
2.5
60.1
54.2
3.9
TRP-241
GLN-242
4.1
3.9
-0.5
-5.7
45.6
45.6
23.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees