Sugar Transport Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-130   GLY-131  3.6 3.8 7.6 1.3 73.1 74.4 9.2
 GLY-131   THR-132  0.5 1.0 5.9 2.8 49.7 46.7 29.2
 THR-132   PRO-133  2.6 3.0 -8.9 5.3 62.1 61.1 1.5
 PRO-133   LYS-134  6.3 6.7 -0.6 4.7 75.9 75.7 -3.9
 LYS-134   GLN-135  7.5 7.8 -5.5 1.3 37.0 33.0 13.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-263   GLY-264  5.5 5.4 9.5 2.6 127.1 129.3 -24.0
 GLY-264   LEU-265  3.2 3.3 -13.8 15.0 71.0 77.7 48.8
 LEU-265   TRP-266  2.0 2.1 0.1 -13.0 113.5 120.9 58.7
 TRP-266   ASP-267  3.2 3.3 -1.1 1.6 118.8 112.8 10.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-327   VAL-328  3.4 3.0 -15.8 -2.3 22.5 30.8 62.8
 VAL-328   ILE-329  3.4 3.3 -1.3 9.3 62.3 62.0 1.6
 ILE-329   PHE-330  4.3 4.2 6.0 -4.6 159.6 157.5 -10.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees