Adp-Dependent Glucokinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-39   ASN-40  4.8 4.4 -1.5 -0.1 82.4 86.3 -2.4
 ASN-40   ILE-41  2.4 1.8 -1.8 -6.6 17.1 17.5 40.3
 ILE-41   ASP-42  3.2 2.9 -1.1 -1.1 92.2 94.9 4.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-114   GLU-115  12.0 11.9 -2.9 8.3 99.8 98.1 25.7
 GLU-115   LEU-116  8.9 8.8 4.3 -6.2 145.6 145.0 -3.1
 LEU-116   ARG-117  5.9 5.7 4.8 -12.6 92.8 90.2 79.6
 ARG-117   ILE-118  5.9 5.1 2.0 0.4 147.6 154.0 -26.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-180   GLU-181  7.5 8.2 2.1 -7.5 123.2 124.1 -27.7
 GLU-181   LEU-182  5.5 6.1 4.5 -9.0 47.6 51.5 -6.4
 LEU-182   ILE-183  3.7 4.1 6.1 -16.0 121.4 123.5 50.7
 ILE-183   HIS-184  6.2 6.1 6.0 -4.3 61.3 64.4 6.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-211   ASP-212  5.6 5.5 1.8 0.3 164.0 166.3 -14.7
 ASP-212   TYR-213  5.3 5.2 -1.3 -0.9 70.8 75.2 38.3
 TYR-213   ASN-214  1.9 2.2 1.2 -3.7 101.7 98.8 -0.9
 ASN-214   ALA-215  2.1 1.7 -0.4 -6.6 39.8 40.7 47.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees