DNA Polymerase Beta
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
CYS-178
GLY-179
2.4
2.3
13.5
-5.5
34.6
49.3
21.3
GLY-179
SER-180
2.3
2.6
72.2
-43.1
45.5
42.8
70.0
SER-180
PHE-181
2.3
2.3
12.7
-6.3
75.3
82.3
16.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-184
ALA-185
5.6
5.3
-6.9
3.8
35.3
35.6
19.8
ALA-185
GLU-186
3.5
3.4
-47.3
54.5
41.3
42.0
-48.7
GLU-186
SER-187
2.8
3.1
-16.2
-1.5
75.9
77.4
-9.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-263
GLN-264
4.3
5.3
-35.7
28.4
111.2
112.4
-35.5
GLN-264
TYR-265
3.0
2.9
24.6
20.3
12.6
20.0
198.8
TYR-265
TYR-266
3.7
3.5
-10.4
10.0
114.2
115.4
-9.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees