Protein (Surface Antigen Psaa)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LYS-185   GLU-186  13.9 13.5 10.0 -4.3 63.4 62.3 63.7
 GLU-186   SER-187  12.8 12.4 -7.0 6.1 59.8 58.1 -45.2
 SER-187   LYS-188  10.2 10.0 -36.2 15.5 32.0 35.7 216.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLY-206   ALA-207  6.3 6.4 -1.7 -2.9 71.2 72.7 10.5
 ALA-207   PHE-208  4.4 4.7 -7.2 -5.0 69.7 64.1 61.6
 PHE-208   LYS-209  2.1 2.1 9.0 -10.2 53.2 52.9 5.7
 LYS-209   TYR-210  1.4 1.5 15.0 1.2 67.8 70.4 27.8
 LYS-209   TYR-210  1.4 1.5 15.0 1.2 67.8 70.4 27.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LYS-209   TYR-210  1.4 1.5 15.0 1.2 67.8 70.4 27.8
 LYS-209   TYR-210  1.4 1.5 15.0 1.2 67.8 70.4 27.8
 TYR-210   PHE-211  3.7 3.4 0.3 2.5 40.6 41.7 2.4
 PHE-211   SER-212  3.6 3.4 -2.1 -2.1 69.6 65.6 15.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 PRO-218   SER-219  9.2 9.3 -6.7 41.0 68.4 74.1 -9.8
 SER-219   ALA-220  7.7 7.6 -9.0 -3.0 137.3 123.1 -13.6
 ALA-220   TYR-221  9.4 10.0 -13.1 -11.3 68.1 67.1 75.2
 TYR-221   ILE-222  10.4 10.6 -8.6 8.3 118.1 124.3 -59.0
 ILE-222   TRP-223  13.4 13.4 -0.1 1.8 136.4 138.0 -22.2
 TRP-223   GLU-224  11.9 12.1 5.2 -3.1 95.2 87.5 -130.6
 GLU-224   ILE-225  8.4 9.0 -157.2 85.1 61.3 71.0 352.4
 ILE-225   ASN-226  9.6 8.6 -3.5 127.4 80.2 138.0 221.6
 ASN-226   THR-227  12.9 11.7 51.1 -11.2 48.4 65.6 369.8
 THR-227   GLU-228  14.8 13.6 162.2 -2.4 50.8 104.4 -323.1
 GLU-228   GLU-229  14.8 17.3 110.9 -39.8 116.8 126.8 -475.0
 GLU-229   GLU-230  17.5 18.9 -33.5 -25.2 27.2 59.9 525.6
 GLU-230   GLY-231  18.3 17.2 86.9 -1.4 106.1 110.7 -409.7
 GLY-231   THR-232  18.1 18.5 -11.1 -4.3 116.0 122.4 -104.2
 THR-232   PRO-233  20.6 20.6 -5.1 -0.1 84.1 86.9 -2.6
 PRO-233   GLU-234  22.6 22.7 1.5 1.8 55.0 56.5 -8.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ILE-277   PHE-278  7.4 7.2 -21.0 30.2 107.8 108.0 17.8
 PHE-278   THR-279  6.3 6.4 19.1 -11.0 30.7 22.9 72.8
 THR-279   ASP-280  6.3 6.7 11.6 -5.0 85.5 84.9 65.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LYS-297   TYR-298  2.4 2.3 2.6 -2.1 86.1 85.7 44.4
 TYR-298   ASN-299  1.9 2.0 1.7 -7.0 146.0 147.2 39.3
 ASN-299   LEU-300  2.8 2.8 6.2 -12.1 94.1 96.1 0.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees