Abc Transporter, Substrate Binding Protein (Polyamine)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-120
PHE-121
5.7
5.2
-3.2
0.7
73.6
77.9
7.0
PHE-121
TYR-122
4.1
3.8
-3.1
25.1
149.4
147.7
124.5
TYR-122
TYR-123
3.7
3.7
-39.7
17.2
94.1
103.3
4.1
TYR-123
SER-124
6.8
6.9
4.2
-11.8
42.5
33.5
-20.3
SER-124
PHE-125
8.8
9.0
7.1
2.9
58.0
59.8
-17.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-245
ALA-246
5.7
6.3
7.1
-8.6
112.9
105.7
3.5
ALA-246
ALA-247
2.7
3.0
7.7
8.8
29.9
23.7
66.8
ALA-247
ASP-248
2.8
2.3
-14.7
11.2
82.7
83.8
21.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-304
ASP-305
10.5
10.2
-7.8
-4.9
78.1
90.5
6.1
ASP-305
GLN-306
10.6
9.4
7.7
-14.0
101.2
103.3
-1.5
GLN-306
GLN-307
14.2
13.1
-11.6
42.6
153.3
136.5
122.8
GLN-307
THR-308
14.6
14.4
24.4
-26.3
46.8
38.9
-21.4
THR-308
GLU-309
13.6
14.9
11.7
-18.1
47.0
55.5
4.0
GLU-309
SER-310
17.1
18.4
20.7
-30.1
16.5
12.5
-70.2
SER-310
GLN-311
15.8
16.8
82.5
-83.9
84.5
92.9
42.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees