Pyruvate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-85   GLY-86  7.0 6.9 9.8 -20.1 113.5 110.4 18.6
 GLY-86   PRO-87  3.3 3.2 24.8 -17.5 84.2 95.1 -0.5
 PRO-87   GLU-88  3.9 4.1 -67.2 25.4 40.5 41.7 151.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-177   ASN-178  11.3 11.8 -32.8 20.7 102.4 101.5 -4.0
 ASN-178   LEU-179  8.8 9.1 -21.7 15.8 113.2 106.5 -7.6
 LEU-179   PRO-180  9.6 10.1 -6.1 15.4 128.6 121.2 -26.7
 PRO-180   GLY-181  7.8 8.2 171.2 139.7 81.3 86.7 13.7
 GLY-181   CYS-182  10.7 9.6 46.5 -23.8 149.2 133.5 -5.9
 CYS-182   ASP-183  11.0 11.2 5.1 -9.9 128.0 139.8 16.2
 ASP-183   VAL-184  10.6 11.0 -15.4 6.2 30.9 32.5 45.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-188   VAL-189  4.0 3.3 3.2 10.2 109.7 125.9 -3.7
 VAL-189   SER-190  1.4 1.6 -39.0 15.8 58.5 54.8 66.8
 SER-190   ALA-191  2.3 2.5 6.3 -1.3 156.7 157.8 -24.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees