Dtdp-Glucose Oxidoreductase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-153   VAL-154  11.1 11.1 14.2 -12.4 157.0 158.7 26.8
 VAL-154   TYR-155  13.2 13.3 -4.4 3.0 77.9 78.7 15.4
 TYR-155   ALA-156  13.1 13.1 -3.1 -3.8 18.3 20.0 170.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-182   TYR-183  4.5 4.2 -9.1 11.9 155.5 155.6 96.3
 TYR-183   GLY-184  4.7 5.0 -9.3 -2.4 125.5 123.2 -138.6
 GLY-184   ALA-185  6.7 6.9 -2.0 0.7 165.4 164.5 85.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-221   THR-222  2.2 2.4 -14.5 29.2 141.2 141.3 153.9
 THR-222   TRP-223  1.3 1.2 -10.2 -2.3 73.2 71.1 3.9
 TRP-223   HIS-224  4.7 4.7 -4.0 11.7 80.5 84.5 -32.0
 HIS-224   ASP-225  5.3 5.2 -8.6 -8.1 28.1 24.7 354.5
 ASP-225   TYR-226  4.1 4.1 21.9 -13.3 138.9 141.2 -301.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-247   ALA-248  11.7 12.1 -17.1 2.5 82.9 83.8 118.9
 ALA-248   VAL-249  7.9 8.3 9.3 -7.7 163.7 162.1 -171.1
 VAL-249   PRO-250  6.6 6.4 -10.1 -26.7 76.3 84.0 373.4
 PRO-250   THR-251  3.8 2.9 -52.8 81.4 96.1 66.9 -83.2
 THR-251   SER-252  5.4 5.0 -33.0 -8.9 36.3 36.0 423.9
 SER-252   ALA-253  6.2 6.0 22.7 -7.8 93.3 110.5 -136.6
 ALA-253   TYR-254  8.3 7.5 6.7 -22.9 70.4 76.1 -229.2
 TYR-254   PRO-255  10.7 10.4 -3.2 -2.6 69.6 90.7 -24.3
 PRO-255   THR-256  13.1 12.5 -12.4 35.6 142.7 143.5 268.8
 THR-256   PRO-257  14.5 14.2 14.7 -7.3 118.2 117.9 -142.1
 PRO-257   ALA-258  17.3 17.2 5.4 1.0 80.3 85.7 -103.0
 ALA-258   SER-259  16.6 16.6 15.0 -17.4 90.5 94.1 11.4
 SER-259   ARG-260  13.7 13.7 7.6 -4.5 21.1 22.1 93.9
 ARG-260   PRO-261  11.6 11.8 2.6 4.6 95.2 97.4 -167.8
 PRO-261   GLY-262  10.5 11.0 -10.4 2.9 102.9 106.8 -51.6
 GLY-262   ASN-263  7.5 7.8 5.9 9.0 34.0 39.8 215.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-282   GLU-283  4.6 4.7 -8.9 12.9 66.3 71.7 -87.3
 GLU-283   LEU-284  1.4 1.5 -15.2 5.8 25.5 27.5 53.5
 LEU-284   GLY-285  2.6 2.4 2.8 -4.4 88.3 94.2 64.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees