Lysine-Sensitive Aspartokinase 3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-223   PRO-224  12.4 11.2 6.7 6.9 87.1 74.0 -3.8
 PRO-224   GLY-225  10.1 9.6 -77.5 23.4 32.2 47.7 112.5
 GLY-225   ILE-226  7.6 7.6 0.9 0.5 147.1 147.2 -8.3
 ILE-226   TYR-227  7.8 8.6 17.1 -18.2 117.1 94.9 -10.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-241   GLU-242  8.2 7.8 -16.4 25.1 102.4 109.5 20.3
 GLU-242   ILE-243  5.8 5.9 -11.8 22.2 161.8 158.0 16.5
 ILE-243   ALA-244  3.5 3.8 -22.9 28.7 94.6 108.1 4.6
 ALA-244   PHE-245  2.6 3.0 -8.9 -14.7 101.6 95.5 -30.0
 PHE-245   ALA-246  3.7 2.8 13.3 10.5 37.3 30.2 46.2
 ALA-246   GLU-247  3.7 2.3 3.4 -25.2 86.6 85.6 -13.8
 GLU-247   ALA-248  1.4 1.6 12.3 12.5 121.1 125.4 -39.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-251   ALA-252  7.7 7.6 151.7 15.2 116.1 100.9 214.8
 ALA-252   THR-253  9.8 11.2 -13.7 -15.1 132.6 22.0 -255.0
 THR-253   PHE-254  11.4 12.5 34.4 13.8 61.4 133.1 400.6
 PHE-254   GLY-255  12.2 9.5 -71.2 166.9 55.9 84.3 -7.2
 GLY-255   ALA-256  14.0 11.1 -39.6 13.3 29.8 67.0 37.3
 ALA-256   LYS-257  11.6 14.5 -144.5 -32.8 39.3 12.2 -499.3
 LYS-257   VAL-258  13.9 14.1 15.0 -64.7 143.1 125.9 89.4
 VAL-258   LEU-259  11.3 10.9 -132.1 44.1 90.0 100.9 10.5
 LEU-259   HIS-260  10.2 10.7 29.7 -15.2 57.0 18.9 27.4
 HIS-260   PRO-261  13.0 11.4 -10.5 2.2 141.9 99.7 -13.0
 PRO-261   ALA-262  12.5 8.7 -19.7 48.9 87.7 92.1 0.3
 ALA-262   THR-263  13.3 11.6 -40.2 -3.6 41.3 28.3 106.9
 THR-263   LEU-264  11.0 12.2 28.9 -21.7 74.6 109.2 -19.4
 LEU-264   LEU-265  8.8 9.3 9.3 4.3 63.4 58.5 7.4
 LEU-265   PRO-266  12.0 10.9 10.8 5.0 127.0 117.1 -26.5
 PRO-266   ALA-267  13.1 13.3 -2.8 -15.4 82.0 65.3 10.4
 ALA-267   VAL-268  9.7 10.6 -1.7 8.1 132.7 132.4 14.6
 VAL-268   ARG-269  10.2 9.0 -3.0 1.1 87.9 116.6 8.5
 ARG-269   SER-270  14.0 12.4 3.4 20.7 134.5 125.0 -41.4
 SER-270   ASP-271  14.0 13.9 7.6 -3.8 104.8 113.5 2.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-288   VAL-289  2.3 2.3 -10.4 12.0 20.6 19.4 -2.7
 VAL-289   CYS-290  1.3 1.6 -13.7 27.9 89.2 82.9 -15.1
 CYS-290   ASN-291  5.0 5.1 -20.5 -12.2 21.3 22.3 81.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees