Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-107
LEU-108
5.9
5.6
-23.0
16.3
129.1
128.7
-15.7
LEU-108
GLY-109
2.6
2.3
30.3
-37.7
124.9
117.2
22.6
GLY-109
ILE-110
2.2
2.4
18.4
-3.3
46.7
43.3
51.0
ILE-110
SER-111
5.6
5.5
10.2
-10.0
70.8
69.8
8.2
SER-111
ILE-112
6.3
6.0
-7.5
4.7
138.2
139.2
-13.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-210
ILE-211
5.1
4.8
-1.9
9.0
141.5
131.4
46.7
ILE-211
ASP-212
7.0
6.9
-21.4
9.2
137.0
144.4
-51.5
ASP-212
SER-213
4.3
4.8
-1.5
2.1
80.3
85.2
19.2
SER-213
LYS-214
1.3
1.7
21.6
-12.2
79.7
81.3
23.9
LYS-214
GLY-215
4.6
4.5
-24.7
10.7
51.7
60.5
56.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees