Ribose Abc Transporter, Periplasmic Ribose- Binding Protein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-101
ILE-102
8.6
8.7
-17.5
18.8
127.3
126.1
34.4
ILE-102
TYR-103
6.5
6.8
14.3
4.7
78.8
81.5
13.6
TYR-103
SER-104
3.4
3.3
-11.3
-10.3
95.1
117.8
-39.0
SER-104
ASP-105
0.8
0.2
-27.1
3.9
34.9
47.4
83.3
ASP-105
ASN-106
3.4
3.2
-1.0
7.0
88.6
91.0
20.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-243
GLN-244
6.6
6.5
11.6
-5.2
54.6
53.7
14.5
GLN-244
PHE-245
3.7
3.2
-6.2
-3.4
42.7
48.1
22.7
PHE-245
PRO-246
1.1
0.3
-4.5
-1.4
101.4
108.3
6.0
PRO-246
LYS-247
4.8
3.8
0.1
-0.4
120.1
117.5
-4.2
LYS-247
LEU-248
5.6
5.6
3.8
-3.6
67.2
69.4
5.8
LEU-248
MET-249
5.5
5.8
13.8
-7.9
33.5
24.0
-1.2
MET-249
ALA-250
6.2
6.0
2.7
-0.1
97.6
92.8
17.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-270
VAL-271
7.4
7.4
-8.3
-13.4
137.5
141.1
27.9
VAL-271
PRO-272
6.9
7.1
-14.1
5.0
105.9
124.3
-3.6
PRO-272
VAL-273
4.0
4.6
2.4
1.0
16.1
20.8
-11.7
VAL-273
THR-274
3.3
4.5
-11.1
8.3
97.8
102.8
15.1
THR-274
VAL-275
5.0
5.7
13.2
-5.0
56.9
49.0
23.2
VAL-275
GLU-276
5.4
5.8
8.8
-7.5
65.9
65.6
34.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees