3-Octaprenyl-4-Hydroxybenzoate Carboxy-Lyase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-222   ALA-223  10.1 10.7 -20.5 12.8 86.3 74.8 -40.2
 ALA-223   ASP-224  6.7 7.2 -15.4 9.4 34.9 31.5 -13.6
 ASP-224   PRO-225  7.0 6.6 -16.1 -11.6 35.1 36.8 271.6
 PRO-225   ALA-226  7.3 7.4 2.1 -7.2 112.4 122.2 56.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-254   VAL-255  6.7 6.9 66.2 -73.6 121.7 111.1 129.7
 VAL-255   VAL-256  4.0 4.4 -30.2 18.4 14.1 9.0 94.6
 VAL-256   LYS-257  3.7 3.6 9.3 -15.4 117.7 109.8 85.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees