RNA Polymerase Beta Subunit
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-45
ASP-46
3.6
4.8
-67.6
92.9
121.5
147.1
7.8
ASP-46
GLU-47
0.9
2.3
3.6
-2.6
37.3
43.4
-1.8
GLU-47
ARG-48
1.2
2.7
110.0
112.1
77.7
77.5
-7.2
ARG-48
ILE-49
3.3
3.0
-44.8
-44.2
58.9
100.5
65.8
ILE-49
PHE-50
5.0
3.2
104.6
-14.8
79.8
69.8
-29.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-78
GLU-79
2.1
6.8
-145.7
11.0
38.6
60.6
68.6
GLU-79
VAL-80
5.1
9.2
153.4
20.3
87.6
105.1
4.6
VAL-80
THR-81
6.8
10.1
0.1
-152.1
123.5
75.3
14.2
THR-81
LYS-82
10.3
10.5
-158.5
-6.9
124.8
155.9
-89.3
LYS-82
SER-83
11.3
9.1
-71.0
104.9
167.1
127.1
17.8
SER-83
ILE-84
10.8
10.8
-14.8
105.0
119.4
62.5
1.4
ILE-84
VAL-85
13.3
13.8
80.7
117.7
74.4
52.4
-50.9
VAL-85
ARG-86
11.4
15.8
42.4
-20.0
27.5
78.0
6.8
ARG-86
ARG-87
9.1
15.3
-152.3
-10.2
142.0
149.6
119.7
ARG-87
TYR-88
12.2
14.6
-145.3
-90.7
102.1
82.9
-5.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees