D-3-Phosphoglycerate Dehydrogenase, Putative

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-96   ASN-97  9.0 8.8 1.7 -5.7 150.8 161.4 -0.3
 ASN-97   THR-98  7.4 7.3 0.5 -2.3 107.1 108.2 -4.9
 THR-98   PRO-99  4.4 4.4 -8.5 18.2 80.1 75.3 17.7
 PRO-99   GLY-100  2.2 2.8 -4.5 -10.3 59.5 43.3 30.5
 GLY-100   GLN-101  2.4 3.1 -17.4 21.4 29.1 34.1 -1.3
 GLN-101   ASN-102  0.2 1.0 -27.1 25.8 36.0 32.2 3.4
 ASN-102   ARG-103  3.4 3.9 -5.1 1.8 86.4 77.1 22.5
 ARG-103   ASN-104  5.8 5.5 4.0 -7.5 146.9 153.8 3.8
 ASN-104   GLY-105  6.5 5.8 -3.1 8.4 46.3 45.6 -20.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-268   GLU-269  4.3 5.0 8.6 4.3 95.9 101.3 -23.7
 GLU-269   GLU-270  3.5 4.4 -12.2 -3.2 44.9 34.9 32.6
 GLU-270   SER-271  1.5 2.1 -1.2 -15.1 22.7 23.6 48.3
 SER-271   ASN-272  2.1 2.7 4.9 9.8 103.8 106.4 -33.8
 ASN-272   ILE-273  5.5 6.2 -6.8 16.7 81.3 70.3 -21.1
 ILE-273   ASN-274  6.1 6.4 -13.6 0.9 32.7 21.6 37.2
 ASN-274   ALA-275  4.2 4.2 -11.4 -0.2 37.8 43.9 22.6
 ALA-275   GLY-276  5.2 5.5 5.4 -6.0 95.2 96.9 12.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees