Transferrin Receptor Protein 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-187   VAL-188  6.6 6.6 6.2 -5.9 93.3 92.6 43.7
 VAL-188   LYS-189  3.0 3.0 -1.6 1.2 85.5 86.2 50.8
 LYS-189   ILE-190  3.3 3.4 -0.8 -0.8 146.2 145.9 -70.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-383   ILE-384  7.1 7.2 2.1 -2.0 129.1 128.9 66.7
 ILE-384   LYS-385  8.3 8.3 1.8 -2.1 91.1 90.5 31.5
 LYS-385   ILE-386  9.5 9.5 0.5 -1.0 159.0 158.5 6.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees