Orotidine 5'-Monophosphate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-18   VAL-19  5.9 5.8 -2.7 -4.9 72.6 75.5 8.8
 VAL-19   ALA-20  7.9 7.8 3.8 -2.5 111.1 112.7 -27.3
 ALA-20   LEU-21  7.9 7.9 8.1 -7.0 153.8 153.9 43.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-36   ASP-37  13.5 13.2 0.2 5.8 77.7 83.2 -17.7
 ASP-37   PRO-38  12.8 12.6 -11.1 3.5 43.9 50.3 13.8
 PRO-38   ARG-39  10.7 10.4 -9.9 16.3 29.3 36.6 -41.1
 ARG-39   ASP-40  13.4 13.5 -10.6 -9.4 57.0 42.3 134.7
 ASP-40   CYS-41  13.2 13.2 4.0 14.4 124.5 123.9 -62.8
 CYS-41   ARG-42  9.6 9.7 -2.0 -2.1 64.5 69.8 9.3
 CYS-41   ARG-42  9.6 9.7 -2.0 -2.1 64.5 69.8 9.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-41   ARG-42  9.6 9.7 -2.0 -2.1 64.5 69.8 9.3
 CYS-41   ARG-42  9.6 9.7 -2.0 -2.1 64.5 69.8 9.3
 ARG-42   LEU-43  6.0 6.0 0.2 -1.5 106.2 105.5 30.8
 LEU-43   LYS-44  3.9 3.9 -12.6 15.1 109.9 111.1 -24.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-183   PHE-184  9.6 10.0 23.6 -11.6 64.0 72.8 85.6
 PHE-184   LYS-185  6.9 7.1 -13.1 9.4 118.6 118.5 5.2
 LYS-185   LEU-186  4.7 5.0 -4.1 4.2 83.8 77.8 9.4
 LEU-186   VAL-187  1.0 1.4 -7.7 9.0 143.4 143.6 13.0
 VAL-187   THR-188  1.3 1.1 3.3 -11.6 106.1 105.7 -37.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees