Cpn60(groel)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-187   PHE-188  1.3 1.4 0.2 2.6 122.3 122.7 -5.5
 PHE-188   VAL-189  1.8 1.8 -0.3 -14.2 12.8 12.5 47.1
 VAL-189   GLU-190  2.2 2.2 44.3 -43.7 111.3 114.5 27.5
 GLU-190   GLY-191  4.5 4.5 -4.3 -13.4 22.8 32.1 56.5
 GLY-191   TYR-192  6.2 6.2 0.6 11.7 104.8 106.7 -25.1
 TYR-192   GLN-193  5.7 5.8 -3.1 -1.2 76.3 77.2 2.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-370   LEU-371  9.4 9.2 -16.0 17.6 107.2 103.4 0.6
 LEU-371   ALA-372  12.1 11.7 -1.0 16.0 50.0 46.6 -55.7
 ALA-372   GLY-373  12.5 12.1 -15.8 8.0 68.4 72.3 -21.3
 GLY-373   GLY-374  8.9 9.0 -129.6 72.3 18.2 19.2 210.2
 GLY-374   VAL-375  9.0 8.8 20.4 -4.2 98.5 110.1 -25.2
 VAL-375   ALA-376  6.8 6.9 5.2 3.2 128.1 127.0 -12.5
 ALA-376   VAL-377  5.0 5.1 -2.2 4.3 92.7 92.1 2.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees