Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-109
ILE-110
3.6
3.6
-42.8
34.1
62.3
62.7
53.4
ILE-110
SER-111
3.3
3.2
-5.0
-5.0
42.2
46.8
78.9
SER-111
ILE-112
5.1
5.2
8.5
-6.8
116.0
118.2
-12.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-207
GLY-208
9.2
9.4
-7.1
-18.7
23.4
29.9
218.2
GLY-208
GLY-209
10.8
11.0
20.1
-21.5
107.8
106.5
-43.0
GLY-209
LEU-210
10.6
10.0
8.4
6.5
120.6
128.0
-107.5
LEU-210
ILE-211
7.9
7.6
-4.2
22.2
29.8
36.4
-126.9
ILE-211
ASP-212
7.4
7.7
172.1
169.6
127.0
151.8
20.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees