Glutamate Receptor 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-110   ILE-111  1.6 1.8 -9.2 -9.5 40.8 43.0 120.0
 GLY-110   ILE-111  1.6 1.8 -9.2 -9.5 40.8 43.0 120.0
 ILE-111   SER-112  1.8 1.6 3.0 4.5 129.0 128.6 -11.1
 SER-112   ILE-113  2.3 2.3 16.6 -13.6 140.5 134.5 -0.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-191   LEU-192  6.0 6.3 -2.1 0.7 71.8 74.9 8.8
 LEU-192   GLU-193  4.7 4.8 -6.4 -5.5 65.7 64.3 44.6
 GLU-193   SER-194  3.6 3.6 1.0 11.3 49.6 49.0 58.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-205   CYS-206  5.2 5.0 38.2 -17.1 80.6 72.0 -16.5
 CYS-206   ASP-207  4.0 3.9 9.7 -3.3 92.0 92.0 -13.4
 ASP-207   THR-208  0.2 0.2 0.0 2.7 31.0 27.5 9.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-211   GLY-212  6.8 6.5 6.5 -16.9 163.9 163.6 73.6
 GLY-212   GLY-213  8.5 8.5 14.4 -21.9 133.4 131.4 -2.7
 GLY-213   ASN-214  8.0 7.8 7.1 -2.8 102.1 111.5 -55.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees