Tumor Necrosis Factor Receptor Superfamily Member 10B

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-67   SER-68  11.3 11.1 -11.7 20.2 122.9 142.0 39.1
 SER-68   GLY-69  12.9 12.8 21.9 -10.2 41.9 28.0 82.8
 GLY-69   GLU-70  10.4 10.6 -41.6 24.2 73.3 79.8 -13.1
 GLU-70   VAL-71  7.3 7.5 2.4 4.3 118.7 116.3 -41.1
 VAL-71   GLU-72  6.0 5.9 13.4 -28.4 136.0 138.8 51.3
 GLU-72   LEU-73  4.5 4.5 2.0 -4.7 74.4 79.8 30.8
 LEU-73   SER-74  2.5 3.3 3.3 -0.8 147.3 157.6 -31.4
 SER-74   PRO-75  2.6 3.2 4.3 -5.8 130.8 127.5 10.5
 PRO-75   CYS-76  2.8 3.3 29.4 -17.3 124.1 122.7 -45.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-81   THR-82  4.7 4.2 -7.2 24.5 140.4 140.3 124.6
 THR-82   VAL-83  2.7 2.5 10.1 -24.7 27.2 28.4 -140.4
 VAL-83   CYS-84  2.4 1.8 -5.0 -2.1 128.8 132.1 14.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees