Endothia Aspartic Proteinase (Endothiapepsin) 3 (E.C.3.4.23.6)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-28   LEU-29  10.1 9.9 5.6 -6.8 39.0 42.4 23.6
 LEU-29   ASP-30  8.4 8.1 -0.4 -8.4 152.6 157.8 -78.6
 ASP-30   PHE-31  8.7 8.6 -11.9 5.8 109.4 115.1 -4.0
 PHE-31   ASP-32  5.1 5.0 1.5 -1.6 161.7 162.7 5.2
 PHE-31   ASP-32  5.1 5.0 1.5 -1.6 161.7 162.7 5.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-31   ASP-32  5.1 5.0 1.5 -1.6 161.7 162.7 5.2
 PHE-31   ASP-32  5.1 5.0 1.5 -1.6 161.7 162.7 5.2
 ASP-32   THR-33  5.5 5.2 3.5 -5.5 120.5 118.6 -85.4
 THR-33   GLY-34  2.9 2.6 7.3 -25.8 130.0 132.7 302.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-180   TYR-181  13.6 13.5 -18.2 8.8 73.9 74.4 59.6
 TYR-181   THR-182  11.7 11.7 -8.0 2.3 143.5 141.4 -110.0
 THR-182   ALA-183  9.2 9.3 -3.2 13.2 68.6 69.5 -81.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-207   ASP-211  1.8 2.0 2.0 -0.5 35.7 36.6 40.0
 ASP-211   GLY-212  2.4 2.4 -1.8 1.5 136.2 134.8 -13.8
 GLY-212   ILE-213  3.0 3.1 -6.5 21.5 153.6 153.6 285.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-214   ASP-215  2.3 2.1 7.7 -15.6 145.1 140.4 105.5
 ASP-215   THR-216  4.8 4.7 -13.1 1.7 59.4 59.1 77.4
 THR-216   GLY-217  6.2 6.2 9.1 0.4 107.2 109.9 21.2
 GLY-217   THR-218  8.4 8.2 -12.8 7.1 46.8 53.1 90.3
 GLY-217   THR-218  8.4 8.2 -12.8 7.1 46.8 53.1 90.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-217   THR-218  8.4 8.2 -12.8 7.1 46.8 53.1 90.3
 GLY-217   THR-218  8.4 8.2 -12.8 7.1 46.8 53.1 90.3
 THR-218   THR-219  10.4 10.4 -3.3 9.6 79.5 84.3 2.1
 THR-219   LEU-220  13.1 13.1 -5.4 8.3 30.1 23.8 -177.1
 LEU-220   LEU-221  13.4 13.4 -5.2 4.8 56.0 56.7 99.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-269   GLY-270  19.5 19.4 21.9 -23.1 96.3 87.3 -307.7
 GLY-270   ASP-271  21.0 20.8 14.3 22.3 38.1 38.2 504.5
 ASP-271   TYR-272  22.5 22.3 -18.7 2.5 124.2 115.4 -308.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-273   ASP-274  18.7 18.8 10.3 -5.6 95.2 98.2 -83.2
 ASP-274   PHE-275  22.2 22.2 16.6 -44.5 154.1 149.8 519.9
 PHE-275   GLY-276  21.2 22.0 75.6 -92.5 128.1 101.0 -131.1
 GLY-276   PRO-277  24.6 25.7 25.6 -17.3 65.4 77.4 -293.0
 PRO-277   ILE-278  27.9 28.3 0.2 5.9 101.4 102.8 103.2
 ILE-278   SER-279  27.6 27.8 -6.6 3.6 38.7 40.7 120.9
 SER-279   THR-280  30.4 30.6 11.5 2.5 111.4 110.6 -63.7
 THR-280   GLY-281  31.9 32.5 2.7 -5.7 62.4 57.1 111.8
 GLY-281   SER-282  34.6 35.2 -25.4 18.5 169.2 168.5 -218.4
 SER-282   SER-282A  33.5 33.5 -8.5 -21.7 124.0 114.2 -561.9
 SER-282A   SER-282B  33.4 33.2 31.4 7.1 69.8 52.1 661.9
 SER-282B   CYS-283  30.2 30.2 -10.3 15.7 45.3 47.9 -154.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-300   ILE-301  7.1 7.3 -9.1 14.4 158.6 153.5 120.2
 ILE-301   PHE-302  6.9 7.0 3.6 -2.0 85.6 89.3 -4.3
 PHE-302   GLY-303  6.2 6.3 -0.3 2.2 163.6 165.4 21.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-304   VAL-305  10.6 10.5 -2.8 7.6 124.0 127.8 236.3
 VAL-305   ALA-306  13.1 12.9 0.6 -17.6 61.7 65.1 -212.9
 ALA-306   LEU-307  10.6 10.5 -2.0 11.2 45.1 50.6 144.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-309   ALA-310  14.3 14.1 4.9 -13.7 89.8 93.1 -98.5
 ALA-310   PHE-311  12.6 12.6 -6.6 2.2 160.5 152.8 -27.1
 PHE-311   VAL-312  12.3 12.3 -20.7 24.1 73.8 78.7 -2.6
 VAL-312   VAL-313  8.9 8.9 16.9 -19.6 49.8 49.0 34.3
 VAL-313   PHE-314  8.9 8.8 -0.7 3.1 77.7 77.2 -62.6
 VAL-313   PHE-314  8.9 8.8 -0.7 3.1 77.7 77.2 -62.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-313   PHE-314  8.9 8.8 -0.7 3.1 77.7 77.2 -62.6
 VAL-313   PHE-314  8.9 8.8 -0.7 3.1 77.7 77.2 -62.6
 PHE-314   ASN-315  6.5 6.6 -2.4 22.3 108.2 109.3 330.3
 ASN-315   GLY-316  9.7 9.9 5.0 -0.2 86.7 82.7 -178.8
 GLY-316   ALA-317  9.9 10.1 16.3 -16.0 98.9 94.6 13.5
 GLY-316   ALA-317  9.9 10.1 16.3 -16.0 98.9 94.6 13.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-316   ALA-317  9.9 10.1 16.3 -16.0 98.9 94.6 13.5
 GLY-316   ALA-317  9.9 10.1 16.3 -16.0 98.9 94.6 13.5
 ALA-317   THR-318  13.7 13.7 60.9 -81.6 61.5 75.0 -694.3
 THR-318   THR-319  15.6 14.7 23.7 28.7 23.5 8.2 975.0
 THR-319   PRO-319B  14.4 14.4 -17.8 -14.7 88.0 80.0 -203.6
 PRO-319B   THR-320  10.7 11.0 -13.4 19.4 141.8 132.4 -125.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-321   GLY-322  7.2 7.4 -2.6 5.6 75.7 72.4 -32.3
 GLY-322   PHE-323  10.0 10.1 1.8 5.5 92.6 91.9 144.0
 PHE-323   ALA-324  10.7 10.8 5.8 -2.5 93.2 89.6 -114.2
 ALA-324   SER-325  14.2 14.3 4.4 16.4 91.3 90.5 315.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees