DNA Polymerase IV (Family Y)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-235
PRO-236
10.2
10.1
-2.1
-17.5
64.8
56.0
72.7
GLU-235
PRO-236
15.1
15.4
-2.1
-17.5
51.1
42.5
10.4
PRO-236
ILE-237
12.2
12.7
0.3
22.3
84.4
79.3
4.6
GLU-235
PRO-236
10.2
10.1
-2.1
-17.5
64.8
56.0
72.7
GLU-235
PRO-236
15.1
15.4
-2.1
-17.5
51.1
42.5
10.4
PRO-236
ILE-237
12.2
12.7
0.3
22.3
84.4
79.3
4.6
ILE-237
ARG-238
9.2
9.3
12.7
28.8
82.4
74.3
10.0
ARG-238
THR-239
6.1
7.1
-0.3
27.4
142.6
106.9
12.4
THR-239
ARG-240
3.5
3.5
2.9
46.1
37.7
14.7
34.6
ARG-240
VAL-241
3.8
2.9
43.6
171.5
42.1
65.1
-79.0
VAL-241
ARG-242
1.8
1.1
56.8
79.6
23.4
27.6
97.6
ARG-242
LYS-243
2.3
1.5
22.3
-27.0
48.0
37.7
2.2
LYS-243
SER-244
0.8
0.3
13.1
-12.0
37.0
33.7
2.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees