Rhodopsin Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-368   SER-369  8.8 15.1 -164.8 -41.6 144.3 113.9 -141.7
 SER-369   VAL-370  8.8 13.6 172.8 -68.7 41.0 81.5 29.3
 VAL-370   ASP-371  5.6 9.8 161.5 -35.1 47.1 53.9 60.7
 ASP-371   TYR-372  8.0 7.5 158.9 -25.1 52.4 108.6 30.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-389   ARG-390  6.3 3.6 -163.8 74.9 43.5 112.2 11.9
 ARG-390   ALA-391  5.0 6.2 -177.5 -21.0 30.7 60.5 80.3
 ALA-391   ARG-392  4.7 9.0 -125.4 131.9 74.9 6.5 -5.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-424   GLU-425  14.1 0.6 -158.8 -65.7 60.0 94.1 -17.6
 GLU-425   ALA-426  15.5 4.2 151.1 7.9 173.0 108.5 -79.4
 ALA-426   LEU-427  16.3 6.8 164.9 23.0 115.5 137.2 63.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees